Natural Prodcast podcast

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Konten disediakan oleh JGI. Semua konten podcast termasuk episode, grafik, dan deskripsi podcast diunggah dan disediakan langsung oleh JGI atau mitra platform podcast mereka. Jika Anda yakin seseorang menggunakan karya berhak cipta Anda tanpa izin, Anda dapat mengikuti proses yang diuraikan di sini https://id.player.fm/legal.

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<div class="span index">1</div> <span><a class="" data-remote="true" data-type="html" href="/series/obscurities">Obscurities</a></span>

<div class="span index">1</div> <span><a class="" data-remote="true" data-type="html" href="/series/obscurities">Obscurities</a></span> podcast artwork

<div class="span index">1</div> <span><a class="" data-remote="true" data-type="html" href="/series/obscurities">Obscurities</a></span> podcast artwork

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Obscurities

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11 hari yang lalu11d ago

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Tales of our world's most unusual events, odd objects, and obscurities.

Natural Prodcast

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Konten disediakan oleh JGI. Semua konten podcast termasuk episode, grafik, dan deskripsi podcast diunggah dan disediakan langsung oleh JGI atau mitra platform podcast mereka. Jika Anda yakin seseorang menggunakan karya berhak cipta Anda tanpa izin, Anda dapat mengikuti proses yang diuraikan di sini https://id.player.fm/legal.

Natural Prodcast is a podcast about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, specialized metabolites -- whatever you want to call them, they're the chemicals that make species unique and different from one another, and are incredibly important to medicine, the environment, and human health. Hosts Dan Udwary and Jackie Winter introduce concepts in this exciting field, and talk to the fascinating scientists who work in it. This series brought to you by the US Department of Energy Joint Genome Institute.

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25 episode

#Science #Biology #Chemistry #Natural Sciences #JGI

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Natural Prodcast

17 subscribers

updated sekitar setahun yang lalu

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Beranda serial•Feed

Konten disediakan oleh JGI. Semua konten podcast termasuk episode, grafik, dan deskripsi podcast diunggah dan disediakan langsung oleh JGI atau mitra platform podcast mereka. Jika Anda yakin seseorang menggunakan karya berhak cipta Anda tanpa izin, Anda dapat mengikuti proses yang diuraikan di sini https://id.player.fm/legal.

Natural Prodcast is a podcast about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, specialized metabolites -- whatever you want to call them, they're the chemicals that make species unique and different from one another, and are incredibly important to medicine, the environment, and human health. Hosts Dan Udwary and Jackie Winter introduce concepts in this exciting field, and talk to the fascinating scientists who work in it. This series brought to you by the US Department of Energy Joint Genome Institute.

… continue reading

25 episode

#Science #Biology #Chemistry #Natural Sciences #JGI

Semua episode

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Natural Prodcast

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Natural Prodcast Ep 24 - Jackie Winter and SMC 59:28

1 year yang lalu59:28

59:28

On this bonus episode of Natural Prodcast, it's the Self Promotion Episode! Dan chats with new-ish co host Jackie Winter, from the University of Utah, about her secondary metabolism research on weird microbes and bioactive compounds in the Great Salt Lake. Then, Dan talks (maybe way too much) about the Secondary Metabolism Collaboratory, or SMC , JGI's new data portal for natural product biosynthetic gene clusters. Episode transcript at jgi.doe.gov/natural-prodcast-episode-24-jackie-winter-and-smc.…

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Natural Prodcast Ep 23 - Aaron Puri 37:27

1 year yang lalu37:27

37:27

Natural Prodcast talks to Aaron Puri, from the University of Utah's Chemistry Department. We talked about carbon-fixing methylotrophs, quorum sensing, and inverse stable isotopic labeling. Episode transcript at jgi.doe.gov/natural-prodcast-episode-23-aaron-puri.

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Natural Prodcast Ep 22 - Alison Narayan 37:08

2 years yang lalu37:08

37:08

In this episode, Dan and Jackie talk to Alison Narayan , from the University of Michigan's Life Sciences Institute and Department of Chemistry . We talked broadly about the field of "biocatalysis", about her DNA synthesis project with the JGI to explore flavin monooxygenases, and what we all need to do in the future to figure out how to make predictions about the functionality and chemical capabilities of enzymes. Also, the Prodcast formally declares its position on candy corn.…

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Natural Prodcast Ep 21 - Elizabeth Parkinson 36:53

2 years yang lalu36:53

36:53

Natural Prodcast's interview with Elizabeth (Betsy) Parkinson, from Purdue, about bacterial signaling molecules and regulation of biosynthetic pathways, semisynthetic cyclic peptides, student mental health, and getting kids interested in microbiology.

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Natural Prodcast Ep 20 - Brian Bachmann 37:49

2 years yang lalu37:49

37:49

Natural Prodcast's interview with Vanderbilt Professor of Chemistry, Brian O Bachmann.

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Natural Prodcast Ep 19 - Bill Fenical 1:03:46

2 years yang lalu1:03:46

1:03:46

Natural Prodcast talks to Prof William Fenical of Scripps Institution of Oceanography in San Diego about the beginnings of marine natural products, his experiences in drug discovery, and exploring marine bacteria.

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Natural Prodcast Ep 18 - A CSP Primer 37:38

2 years yang lalu37:38

37:38

It's a crossover episode! Menaka Wilhelm, from JGI's Genome Insider, and I talk about how to work with the JGI, specifically in the form of the Community Science Program, or CSP. We talked to Deputy of User Programs, Tanja Woyke and Project Manager Miranda Harmon-Smith about all the details of what makes a good CSP, how to apply for one, and what happens once it starts.…

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Natural Prodcast Ep 17 - Cassandra Quave 54:34

3 years yang lalu54:34

54:34

Natural Prodcast's Dan and Alison talk to Dr Cassandra Quave of Emory University, and author of The Plant Hunter. Transcript at https://jgi.doe.gov/natural-prodcast-episode-17-cassandra-quave/

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Natural Prodcast Ep 16 - Marcy Balunas 45:01

3 years yang lalu45:01

45:01

Natural Prodcast presents our interview with Professor Marcy Balunas, currently at the University of Connecticut's Department of Pharmaceutical Sciences but soon moving to the University of Michigan's Department of Microbiology and Immunology. In this episode, we discuss her work in in many areas of chemical exploration of natural products for bioactive compound discovery, understanding symbiosis, and a JGI project around ants and their fungus farms. Transcript at https://jgi.doe.gov/natural-prodcast-episode-16-marcy-balunas/…

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Natural Prodcast Ep 15 - Katherine Duncan 47:17

4 years yang lalu47:17

47:17

This is Natural Prodcast's conversation with Professor Katherine Duncan from the University of Strathclyde in Glasgow, Scotland. Dr Duncan's work focuses on marine microbial chemical ecology. We also discuss Actinobase, molecular networking, and the future of integrated secondary metabolism data. Transcript at https://jgi.doe.gov/natural-prodcast-episode-15-katherine-duncan/…

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Natural Prodcast Ep 14 - Nigel Mouncey 41:34

4 years yang lalu41:34

41:34

Our guest on this episode is Dr Nigel Mouncey , JGI's Director, and also lead of the JGI's Secondary Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary metabolism analysis and research as a driver for novel technologies that can serve all JGI users. Nigel has a long scientific background in pathway and gene regulation, and a distinguished career in industry developing natural products for commercial use. Transcript at https://jgi.doe.gov/natural-prodcast-episode-14-nigel-mouncey/…

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Natural Prodcast Ep 13 - Francisco Barona Gomez 48:12

4 years yang lalu48:12

48:12

In this episode of the podcast, we talked a lot about terminology, especially around "secondary metabolism" versus "specialized metabolism" and "primary metabolism" versus "centralized metabolism" and why and how they're different when we take things from a human-centric view rather than a microbe-centric one. It was so fun, and I learned a ton. I hope you will too! Transcript at https://jgi.doe.gov/natural-prodcast-episode-13-francisco-barona-gomez/…

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Natural Prodcast Ep 12 - Nadine Ziemert 39:33

4 years yang lalu39:33

39:33

This is our interview with Nadine Ziermert, from the University of Tubingen. This continues our short series of genome mining, the science of examining DNA sequence to try and predict the structures of secondary metabolites and to understand their evolution. It was a fun, wide-ranging conversation, where we talked about our shared experience working with the marine bacteria Salinispora at Scripps Institution of Oceanography, her accidental entry into data analysis, the evolution of secondary metabolite pathways as viewed through metagenome studies, and what more JGI and others can do to enable progress in this area of natural products. Transcript at https://jgi.doe.gov/natural-prodcast-episode-12-nadine-ziemert/…

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Natural Prodcast Ep 11 - Marnix Medema 53:14

4 years yang lalu53:14

53:14

In this episode, Alison and I talk to Marnix Medema, from Wageningen University in the Netherlands. Marnix and his collaborators have a fantastic set of software tools for exploring secondary metabolite biosynthetic gene clusters (BGCs). Most people in the field are going to be familiar with AntiSMASH , which is available for analysis of your genomes on the web , or you can download a docker container or Anaconda/bioconda package or the source code and run it yourself on your own computer. MIBiG is a repository of experimentally characterized and manually annotated BGCs. And now BiG-SCAPE and/or BiG-SLICE can compare your gene clusters and group them into families, which you can also look at in BiG-FAM . This ecosystem for secondary metabolism has become transformative to the natural products community, and Marnix's enthusiasm for science and excitement about creating fantastic collaborative research projects is infectious. This episode should make a nice jumping-off point into the deeper end of genome mining after the Genome Mining Primer episode, last time. Transcript at https://jgi.doe.gov/natural-prodcast-episode-11-marnix-medema/…

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Natural Prodcast Ep 10 - A Primer on Genome Mining 47:59

4 years yang lalu47:59

47:59

This is one of our "Primer" episodes, in which Alison and Dan discuss the science of genome mining. We talk about the California Gold Rush (it's relevant! I promise!), talk about how genome sequencing has changed genome mining over the years, and we talk about a new publication out of the JGI in which Dan conducted genome mining on metagenome-derived genomes. Check out http://naturalprodcast.com for show notes with links to papers and other learning resources. Transcript at https://jgi.doe.gov/natural-prodcast-episode-10-primer-genome-mining/…

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